Machine Learning in Bioinformatics

Most cited papers

1. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choiceNucleic Acids Research · 1994 · 65,374 citations
2. Highly accurate protein structure prediction with AlphaFoldNature · 2021 · 47,923 citations
3. Prodigal: prokaryotic gene recognition and translation initiation site identificationBMC Bioinformatics · 2010 · 13,803 citations
4. Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequencesBioinformatics · 2006 · 12,464 citations
5. Improved tools for biological sequence comparison.Proceedings of the National Academy of Sciences · 1988 · 11,371 citations
6. InterProScan 5: genome-scale protein function classificationBioinformatics · 2014 · 10,406 citations
7. ColabFold: making protein folding accessible to allNature Methods · 2022 · 10,204 citations
8. cytoHubba: identifying hub objects and sub-networks from complex interactomeBMC Systems Biology · 2014 · 7,051 citations
9. VaxiJen: a server for prediction of protective antigens, tumour antigens and subunit vaccinesBMC Bioinformatics · 2007 · 3,107 citations